Part 2:What Is Neural Codes Of Memory During Sleep?
Mar 10, 2022
For more information:ali.ma@wecistganche.com
Contextual memory
All memories are context-specific, whether being spatial, temporal or emotional, leading to the concept of sequence coding or trajectory coding. As the hippocampal network is connected with the amygdala— a specific brain area responsible for emotions and memory modulation, episodic memories are often associated with emotions, such as happiness, fear, and anxiety. This may occur in memory recall and dream experiences. Notably, sleep consolidates or reshapes emotional memories [97]. One hypothesis is that emotional or contextual memory can be strengthened or weakened in the hippocampus during REM sleep theta activity [98,99]. Recent causal evidence showed that temporally precise attenuation of the theta rhythm impaired fear-conditioned contextual memory [99]. However, how to read out contextual episodic memories embedded with distinct emotions is still a big puzzle. The development of new computational approaches for deciphering hippocampal-amygdala population codes will be an extended research direction.

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Creativity and insight
Creativity involves the forming of associative elements into novel associations that are useful for future task behaviors (e.g., planning, problem solving). Such new association patterns might not occur frequently, and shall not be confused with the “preplay” events [100]. Insight is defined as a neural restructuring process that leads to a sudden gain of explicit knowledge leading to qualitatively changed behavior [101]. Human sleep studies suggested that REM sleep promotes creativity and insight because ofthe changes in cholinergic and noradrenergic neuromodulation [102], which allow neocortical structures to reorganize associative hierarchies and reinterpret the hippocampal information. Computationally, how to detect such new associations of spatiotemporal patterns across a large hippocampal-neocortical network remains unknown. Future simultaneous recordings from multiple targeted brain areas would enable us to examine high-dimensional spatiotemporal spike patterns and evaluate their probabilities of coincident reactivations at different brain states.
Manipulation of memory
To date, neuroscientists have relied on many powerful engineering or genetic tools, such as the virtual environment [103, 104] and optogenetics [53, 105– 108], to manipulate hippocampal memory during wakeful experiences. In virtual environments, rodent hippocampal neurons exhibited different spike firing patterns from real environments. However, it remains unclear how such firing patterns would be affected in sleep. False memories play a significant role in human mental health and legal practice [109]. In a series of groundbreaking experiments [105, 106], researchers stimulated or suppressed memories with optogenetics to manipulate engram-bearing neurons in the mouse hippocampus. Their findings suggested that optogenetic reactivation of memory engram-bearing cells was not only sufficient for the behavioral recall ofthat memory, but also served as a conditioned stimulus for the formation of an associative memory. Techniques of selective enhancement of desired memories and indirect suppression of unwanted memories might find potential translational applications in treating traumatic memories in post-traumatic stress disorder (PTSD) patients. Similarly, it remains unknown how these manipulations affect memory during sleep. Among all experimental manipulations, one key research goal is to study their sleep-associated memory contents and use them to further predict future behavior.
Closed-loop neural interface
Brain-machine interfaces provide not only potential therapies for animals and humans, but also new tools for studying memory processing during sleep [44,53, 110, 111]. Combining various invasive (e.g., electrical) or non-invasive (e.g., optical, acoustic) closed-loop stimulation techniques [39, 112– 115], we can test the causal functions of neural circuits or sleep for memory processing in a real-time manner. For instance, coupling spontaneous reactivation of a place cell during sleep to a reinforcing stimulation ofthe medial forebrain bundle (MFB) induced a place preference during subsequent wake, providing another evidence that place cells encode the same spatial information during sleep and wakefulness [116].

Concluding Remarks
In summary, accumulative experimental evidence has pinpointed the critical role of sleep in consolidating hippocampal-neocortical memories. With advances in large-scale neural population recordings and imaging techniques, it is imperative to develop computationally relevant methods to provide unbiased assessment of memory-related SANC. Despite rapid progress in the last two decades, many outstanding questions still remain. Furthermore, contributions of many other subcortical circuits to various sleep-associated memories remain to be investigated, such as the ventral striatum [117, 118] and the anterior thalamus [119, 120]. Combinations of experimental and computational investigations will be a crucial step forward for improving our understanding ofthis exciting and important research field. Future dissection of memory during sleep will shed light on neural mechanisms of dreaming, creativity, contextual or emotional memories, and will provide further insights into memory-related neurological and psychiatric disorders.
Acknowledgments
We thank B. Bagnasacco, F. Kloosterman and B. Pesaran for valuable comments. This work is supported by an NSF/NIH CRCNS award IIS-1307645 (to Z.C. and M.A.W.) from the US National Science Foundation, an NSF/NIH CRCNS award R01-NS100065 (to Z.C.) from the NINDS, the Office ofNaval Research MURI grant N00014-10-1-0936 and an NIH grant TR01-GM104948 (to M.A.W.). This material is also based upon work supported by the Center for Brains, Minds and Machines (CBMM), funded by NSF STC award CCF-1231216.

Glossary
Episodic Memory
is made of associations of several elements, such as objects, space and times. The associations are encoded by chemical and physical changes in neurons, as well as by modifications to synapses between neurons
Hippocampus
a brain structure within the medial temporal lobe (MTL) that is important for episodic memory, spatial learning and associative recollection. It consists of CA1, CA2, CA3 and dental gyrus, and is connected to various brain structures, including the prefrontal cortex (PFC), entorhinal cortex and amygdala
Memory Consolidation
a process that converts and stabilizes information from short-term memory into long-term storage. The hippocampal-neocortical memory consolidation involves transferring hippocampal episodic memory into the neocortex during the off-line (such as sleep) process after waking experiences in memory acquisition
Population Codes
are referred to neuronal ensemble spike activity that represents and transmits information. Spikes are the basic neuronal language for information and communication. Depending on specific neural circuits, different statistical assumptions are made about the computational principle or information carrier, such as spike count, spike timing, independent or correlation codes
UP and DOWN States
are defined as periods (~a few hundred milliseconds) of synchronized population firing and widespread depolarization, and periods of relative silence and hyperpolarization, respectively. The DOWN states alternate between the UP states during slow wave sleep
Local Field Potential (LFP)
is considered to represent the aggregate subthreshold activity of a local population of neurons in a spatially localized area near the recording electrode and can be viewed as the input information in that area. Spectral analysis ofthe broadband LFP signal can reveal significant oscillatory activity at specific frequency bands
Rapid Eye Movement (REM) Sleep
a sleep stage characterized by quick, random movements ofthe eyes and low muscle tone. REM sleep occurs in cycles of about 90–120 minutes in night and accounts for 20–30% sleep time in adult humans. Most human dream activity occurs in REM sleep. In rodents, REM sleep is accompanied by theta oscillations
Slow Wave Sleep (SWS)
a sleep stage also known as non-REM (NREM) sleep or deep sleep, accounting for ~75% of total sleep time, is characterized by synchronized EEG activity of slow waves with frequency below 1 Hz and relatively high amplitude. Sleep spindles (9–15 Hz) occur during
Place Receptive Field (RF)
a property of localized spatial tuning exhibited prominently in hippocampal pyramidal neurons of rodents and bats. The RF defines the firing property of hippocampal place cells with respect to specific spatial location. On a linear track, the rodent hippocampal place RF is often directionally dependent
False Memory
refers to recall of an event or observation that did not actually occur. Internally generated stimuli can get associated with concurrent external stimuli, which can lead to the formation of false memories

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